Description:
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PKG_CONFIG_PATH=/usr/sqlite-autoconf-3300100/lib/pkgconfig ./configure

checking for sqlite3 > 3.7.4... yes
checking for sqlite3_stmt_readonly in -lsqlite3... no
configure: error: Please install SQLite 3.7.4 first or check libsqlite3 is present

I suspect compilation does not respect sqlite from PKG_CONFIG_PATH.
It would be usefull if it printed sqlite version it uses...

When I cut out these test from configure script I got errors like that, which suggest wrong sqlite version was used.

ext/pdo_sqlite/.libs/sqlite_statement.o: In function `pdo_sqlite_stmt_param_hook':
sqlite_statement.c:(.text+0x58f): undefined reference to `sqlite3_reset'
sqlite_statement.c:(.text+0x5e2): undefined reference to `sqlite3_bind_text'
sqlite_statement.c:(.text+0x620): undefined reference to `sqlite3_bind_null'
sqlite_statement.c:(.text+0x697): undefined reference to `sqlite3_bind_blob'
sqlite_statement.c:(.text+0x6d5): undefined reference to `sqlite3_bind_int64'
sqlite_statement.c:(.text+0x71b): undefined reference to `sqlite3_bind_parameter_index'
sqlite_statement.c:(.text+0x738): undefined reference to `sqlite3_bind_null'
sqlite_statement.c:(.text+0x761): undefined reference to `sqlite3_bind_null'
sqlite_statement.c:(.text+0x7f2): undefined reference to `sqlite3_bind_null'
ext/pdo_sqlite/.libs/sqlite_statement.o: In function `pdo_sqlite_stmt_execute':
sqlite_statement.c:(.text+0x88d): undefined reference to `sqlite3_step'
sqlite_statement.c:(.text+0x8e9): undefined reference to `sqlite3_data_count'
sqlite_statement.c:(.text+0x989): undefined reference to `sqlite3_column_count'
sqlite_statement.c:(.text+0xa07): undefined reference to `sqlite3_reset'
sqlite_statement.c:(.text+0xa15): undefined reference to `sqlite3_reset'
sqlite_statement.c:(.text+0xa3e): undefined reference to `sqlite3_changes'
sqlite_statement.c:(.text+0xa4d): undefined reference to `sqlite3_reset'
collect2: ld returned 1 exit status
make: *** [sapi/cli/php] Error 1